Well Scite excludes a lot by default, but markdown is defined for it. From embedded.proterties:

imports.exclude=abaqus asl asn1 au3 ave avs baan blitzbasic bullant \
cmake cobol coffeescript csound ecl eiffel erlang escript flagship forth freebasic \
gap haskell hex inno kix latex lot lout \
markdown maxima metapost mmixal modula3 nim nimrod nncrontab nsis \
opal oscript pov powerpro powershell ps purebasic r rebol rust \
scriptol smalltalk sorcins spice specman \
tacl tal txt2tags verilog vhdl visualprolog

Guess it probably excludes the ones the Scite maintainer doesn't know or use, little known things like rust for example :)

As the feature request you posted points out, many lexers are contributed, so updates also need to be contributed. The Scintilla maintainer can't know and use all languages. Thats why I subtly suggested with patches :)

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