I don't see why TM couldn't be improved to support other, AST-based parsers. Sure TM is lacking now but we cna fix that. I don't think it's too much work.
Good, modify tag array merging
https://github.com/geany/geany/blob/master/src/tagmanager/tm_tag.c#L375
to work on trees that is similarly fast and let's talk then ;-).
But coming back to this PR. I don't think the proposed query API is affected by the above ideas. It'll always be used to return a list of tags. If the TMTag structure changes for new features or are subtrees instead of plain tags is a different story.
As I think TM should be used for ctags-like tags, lists should be fine. (They would be insufficient if you needed some AST information, e.g. for code completion.)
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