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As you mentioned in #3946, using the GIO method only might be best for config files indeed and I can modify the patch if this is the preferred way. With this patch I just wanted to make sure that fwrite() isn't used as the default method for saving config files which IMO is the worst option of them all.
Over years, this happened to me quite a few times and
Geany, to my recollection is the only application that yields that erratic behaviour
from #3946 resonated with me because Geany really is the only application where I experienced this and it's kind of embarrassing. It's true that I haven't seen it for a long time but I suspect it's because file systems got better rather than fixing something on the Geany side.
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