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It seems the global? setting in Preferences/Files/Saving files is ignored in favour of the same settings in Project Properties/Files/Saving files.
That is the correct and intended operation, project settings are supposed to override global ones. It would be extremely confusing if one setting behaved differently to the others so I do not think this should be applied.
There is/was an issue (don't think it got to a PR) about making that fact more obvious in the UI, but I can't find it now.
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