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I have exactly the same issue. And I would say it is a major issue.
My environment is:
Arch Linux
GNOME Shell 3.26.2
geany 1.33 (generated on 2018-03-06 with GTK 3.22.28, GLib 2.54.3)
The issue is present also running geany -c /nonexistent/folder. I am encountering exactly the same problems described by @bentref.
I can confirm it is not CPU related.
I am using geany since > 5 years and I have never experienced anything similar.
If there is anything I can do, I'll help gladly.
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