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@b4n Yes, the system monitor shows 0% for geany.
Compiled with that line commented out and doesn't affect.
Other difference I have noticed while running geany between the two setups is that the terminal prompt of geany in GNOME doesn't show colors, both systems have libvte9. I don't think this is related to the main problem.
I uploaded a video showing the delays I'm talking about, I hope you can hear the mouse clicks:
https://drive.google.com/file/d/0B_AKPUOZlOCrSUhsTmJFZ3p3NnhvOHJwZzRFalRyVGpuNHJN/view?usp=sharing
It is like using geany through a slow ssh connection.
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