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The geany.pc should be installed in $prefix/lib/pkgconfig/ where it appears your prefix is default /usr/local. That should also be the default search for pkg-config but perhaps your unknown distro has configured pkg-config search path differently.
If that is the case you should follow the instructions pkg-config gave and modify the specified environment variable to include where geany.pc was installed before running the build for geany-plugins.
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