In doc/Makefile.am:

>  
> -all-local: Doxyfile.stamp
> +Doxyfile.stamp: Doxyfile Doxyfile-gi $(doxygen_sources)
> +	$(AM_V_GEN)$(DOXYGEN) Doxyfile-gi && $(DOXYGEN) Doxyfile && echo "" > $@

BTW, will Doxygen reuse some of its findings for the second run? I know you'll hate me because we wanted separate doxyfiles not to alter the existing doc, but as Docygen is relatively slow, if it could reuse its database or something it'd be super nice :)

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