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I just generated the docs without the changes, comitted the results (reference and xml directories) into a new GIT repository and did the same with the changes applied. The resulting diff is only about the generated timestamps and the following:
diff --git a/xml/Doxyfile.xml b/xml/Doxyfile.xml
index 5cb5962..c88d929 100644
--- a/xml/Doxyfile.xml
+++ b/xml/Doxyfile.xml
@@ -362,7 +362,7 @@
<option id='DOT_FONTNAME' default='yes' type='string'><value><![CDATA[Helvetica]]></value></option>
<option id='DOT_FONTSIZE' default='yes' type='int'><value>10</value></option>
<option id='DOT_FONTPATH' default='yes' type='string'><value><![CDATA[]]></value></option>
- <option id='CLASS_GRAPH' default='no' type='string'><value>TEXT</value></option>
+ <option id='CLASS_GRAPH' default='yes' type='string'><value>YES</value></option>
<option id='COLLABORATION_GRAPH' default='yes' type='bool'><value>YES</value></option>
<option id='GROUP_GRAPHS' default='yes' type='bool'><value>YES</value></option>
<option id='UML_LOOK' default='yes' type='bool'><value>NO</value></option>So yes, the CLASS_GRAPH setting is changed implicitly. But everything in the generated files is identical to before, so it seems to be not relevant for us.
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