codebrainz commented on this pull request.
@@ -7,7 +7,7 @@ AC_DEFUN([GEANY_CHECK_DOXYGEN],
[AS_HELP_STRING([--enable-api-docs], [generate API documentation using Doxygen [default=no]])], [geany_with_doxygen="$enableval"], - [geany_with_doxygen="auto"]) + [geany_with_doxygen="no"])
I think the bug is a couple lines up where it says `[default=no]`, it should probably say `[default=auto]`.