I presume your Geany built and runs?

The pkg-config subcommand (the part inside backquotes) of the compile command given in the Building section of the howto should extract the relevant include directories from the Geany install and pass them to the compile, but that is a Linux command.

Is geanyplugin.h actually present in the install of Geany?
Is geany.pc actually present in the install of Geany?
does pkg-config find the installed Geany? Try running pkg-config --cflags geany as a standalone command and see what it returns, one of the -I options should point to a directory which contains geanyplugin.h.
do backquoted subcommands work on the Windows command line?

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