I tried to find how to enable X11 on Fedora or check what I am using (X11 or wayland), so, it seems like the whole time on my laptop I was using X11. Maybe it was because of my cards (Intel + Nvidia).
Now I configured system to finally use Wayland (I hope!), so
$ echo $XDG_SESSION_TYPE
wayland
And... No freezes in Geany!
So, summary:
I am sorry to confuse you.
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